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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4658502_4658920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4658502 - 4658920

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGGG

5'SS Class:

major

3'SS Sequence:

AATTCTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTTTCTGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

56.8

42.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

79.9

0.67

0.9

70.5

40.2

Minor 5ss

-3.1

3.3

28.9

43.6

Minor BPS

70.8

0.73

91.31

32.6

Associated Gene:

Gene:

SNF8

Ensembl Gene ID:

ENSAPLG00000031118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017965

4658311 - 4662808

4498