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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4659060_4659387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4659060 - 4659387

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

TCTCGCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCAAT

U12 Branch Point Sequence:

TCTCGCTTCACA

Flanking Amino Acid:

CATIGVDPLASGKGFWSEML

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

65.9

39.7

Major BPS

54.1

0.1

1.4

64.7

Major PPT

77.9

0.63

0.8

71.5

32.9

Minor 5ss

29.6

-2.3

3.2

38.5

Minor BPS

51.4

0.04

2.2

68.36

44.1

Associated Gene:

Gene:

SNF8

Ensembl Gene ID:

ENSAPLG00000031118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017965

4658311 - 4662808

4498