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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4659493_4661036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4659493 - 4661036

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

CTTTTGTTGACT

Flanking Amino Acid:

VCLALKHRNGGLITLEELHQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.7

85.9

23.8

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

72.8

0.51

0.9

63.3

43.1

Minor 5ss

31.6

-2.1

39.7

45.8

Minor BPS

61.3

0.44

2.1

82.19

39.8

Associated Gene:

Gene:

SNF8

Ensembl Gene ID:

ENSAPLG00000031118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017965

4658311 - 4662808

4498