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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4661110_4661705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4661110 - 4661705

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

CTTGCATTAACC

Flanking Amino Acid:

GRGKFAQEVSQDDLLRAIKK

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

83.3

0.75

0.8

80.1

31.9

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

0.48

1.8

75.46

41.2

Associated Gene:

Gene:

SNF8

Ensembl Gene ID:

ENSAPLG00000031118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017965

4658311 - 4662808

4498