Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_4661848_4662057_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4661848 - 4662057

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGATC

5'SS Class:

major

3'SS Sequence:

TCTCTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTCTCTCTCATT

Flanking Amino Acid:

DHTVVLQLAEKKGYVTVSEI

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

69.9

40.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

84.1

0.77

0.8

81.5

28.8

Minor 5ss

35.8

-1.6

3.4

51.8

Minor BPS

51.2

0.12

2.1

75.83

41.7

Associated Gene:

Gene:

SNF8

Ensembl Gene ID:

ENSAPLG00000031118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017965

4658311 - 4662808

4498