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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4674003_4678078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4674003 - 4678078

Intron Length:

4076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

AGATCCTGACTA

Flanking Amino Acid:

VFGSLIIGYARDIMSIYKEP

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.4

1.09

0.7

Major BPS

0.47

1.2

69.9

35.3

Major PPT

84.2

0.77

0.8

83.8

31.2

Minor 5ss

35.1

-1.7

2.7

41.5

45.1

Minor BPS

50.6

0.01

1.7

60.61

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024207

4669971 - 4680447

10477