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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4678255_4678530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4678255 - 4678530

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTATCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCATTATTAATA

Flanking Amino Acid:

FSRPEVQTVQPAGVSYPQLS

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

35.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.5

0.6

0.9

69.9

36.2

Minor 5ss

36.5

-1.5

3.2

50.8

45.8

Minor BPS

62.2

0.38

1.6

68.77

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024207

4669971 - 4680447

10477

ENSAPLT00000034101

4677511 - 4680447

2937