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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4678609_4679247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4678609 - 4679247

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTGGC

5'SS Class:

major

3'SS Sequence:

TGTTCTGCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TAAGCGTTAATT

Flanking Amino Acid:

PVALLGSPALFRCCSRALAR

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

63.7

41.8

Major BPS

76.9

0.67

66.3

40.4

Major PPT

80.3

0.68

0.9

77.5

36.9

Minor 5ss

32.1

-2

3.4

40.7

Minor BPS

55.3

0.24

2.1

73.78

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034101

4677511 - 4680447

2937

ENSAPLT00000024207

4669971 - 4680447

10477