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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4679297_4679389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4679297 - 4679389

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCCG

5'SS Class:

major

3'SS Sequence:

TTTTGTCCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAC

U12 Branch Point Sequence:

CCCGGGTTCACT

Flanking Amino Acid:

SHSRRQREPRRETTMQTPVA

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

44.7

Major BPS

57.1

0.18

1.3

63.1

44.5

Major PPT

78.4

0.64

0.8

74.2

Minor 5ss

24.2

-3

3.2

29.7

43.3

Minor BPS

36.9

-0.9

2.6

50.03

49.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034101

4677511 - 4680447

2937

ENSAPLT00000024207

4669971 - 4680447

10477