Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_4684902_4685392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4684902 - 4685392

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAACAA

5'SS Class:

major

3'SS Sequence:

CTTTGATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CTGTCTTTGATT

Flanking Amino Acid:

ELQEELKKTQKLQNGLESLR

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

61.3

39.2

Major BPS

0.85

0.9

39.9

Major PPT

84.3

0.77

0.8

81.1

35.5

Minor 5ss

29.6

-2.3

3.3

38.7

46.3

Minor BPS

69.9

0.71

1.2

78.01

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048080

4681205 - 4691120

9916

ENSAPLT00000013956

4681205 - 4691120

9916