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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4685722_4686498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4685722 - 4686498

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAAAC

5'SS Class:

major

3'SS Sequence:

TCTTTCTCCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAAATTTTCACT

Flanking Amino Acid:

TALDHMDQLQSQVLNYEKDM

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

68.4

36.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

0.67

0.7

73.7

31.4

Minor 5ss

31.7

-2.1

3.3

42.3

44.8

Minor BPS

51.8

0.14

1.8

70.15

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048080

4681205 - 4691120

9916

ENSAPLT00000013956

4681205 - 4691120

9916