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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4686622_4688488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4686622 - 4688488

Intron Length:

1867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTCCACAATT

Flanking Amino Acid:

RQLRMTVTQQQQNRDLMKEL

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.4

38.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

84.9

0.79

0.7

80.2

25.3

Minor 5ss

-1.8

3.3

49.1

46.6

Minor BPS

67.7

0.63

1.8

89.6

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048080

4681205 - 4691120

9916