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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4687442_4688488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4687442 - 4688488

Intron Length:

1047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCCAGC

5'SS Class:

major

3'SS Sequence:

TCTTCCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTCCACAATT

Flanking Amino Acid:

NLSLRLQNEQQQNRDLMKEL

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.2

54.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

84.9

0.79

0.7

80.2

25.3

Minor 5ss

38.8

-1.3

3.1

52.2

44.6

Minor BPS

67.7

0.63

1.8

89.6

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013956

4681205 - 4691120

9916