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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4689424_4689820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4689424 - 4689820

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GCTAAATGAACT

Flanking Amino Acid:

GCLVFGNPYYAAEANLESKA

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

75.5

34.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

34.5

-1.8

3.5

48.1

47.5

Minor BPS

46.7

-0.1

1.9

65.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048080

4681205 - 4691120

9916

ENSAPLT00000013956

4681205 - 4691120

9916