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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4807068_4807962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4807068 - 4807962

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACAGCTA

5'SS Class:

major

3'SS Sequence:

CCGTGTTATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

AAATCAAAAACC

Flanking Amino Acid:

PWMRKLHISHDMTGPDGKRA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.1

55.8

42.8

Major BPS

62.4

0.31

32.1

Major PPT

71.9

0.49

Minor 5ss

32.8

-2

3.7

43.9

45.8

Minor BPS

45.1

-0.3

2.1

57.66

Associated Gene:

Gene:

HOXB5

Ensembl Gene ID:

ENSAPLG00000013657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014225

4806183 - 4808210

2028