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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4840245_4841979_F

Intron Information:

Intron Rank:

144298

Intron Class:

major

Intron Phase:

Intron Coordinates:

4840245 - 4841979

Intron Length:

1735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TGGAGCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.5

35.6

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

87.5

0.84

0.7

80.8

31.2

Minor 5ss

30.3

-2.3

3.3

33.4

Minor BPS

47.6

-0.1

65.15

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041203

4840161 - 4843416

3256