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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4885104_4890519_F

Intron Information:

Intron Rank:

129661

Intron Class:

major

Intron Phase:

Intron Coordinates:

4885104 - 4890519

Intron Length:

5416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCAACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TAATCTTTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.2

39.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

63.7

0.31

0.9

53.3

36.2

Minor 5ss

30.2

-2.3

2.6

28.5

Minor BPS

64.1

0.43

1.7

72.3

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033862

4884873 - 4891492

6620