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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4890649_4891150_F

Intron Information:

Intron Rank:

129662

Intron Class:

major

Intron Phase:

Intron Coordinates:

4890649 - 4891150

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTACCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTGAGTTCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

77.3

0.68

81.5

Major PPT

75.8

0.58

0.8

69.3

30.2

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

46.1

-0.2

66.05

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033862

4884873 - 4891492

6620