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Intron Name: Anas_platyrhynchos_platyrhynchos_28_489469_502971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

489469 - 502971

Intron Length:

13503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CGCCCCCTGACA

Flanking Amino Acid:

QTFVATQEQRLTYLPPPWGE

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.7

41.3

Major BPS

72.4

0.56

73.5

32.5

Major PPT

81.6

0.71

0.7

75.8

26.2

Minor 5ss

-1.7

2.8

37.9

39.5

Minor BPS

49.4

-0

1.7

57.67

41.5

Associated Gene:

Gene:

ASIC2

Ensembl Gene ID:

ENSAPLG00000009431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033879

401014 - 510023

109010

ENSAPLT00000009829

401168 - 510023

108856