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Intron Name: Anas_platyrhynchos_platyrhynchos_28_5039685_5040452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5039685 - 5040452

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTTCTTTCTA

Flanking Amino Acid:

KQGYLEKRSRDHSFFGSEWQ

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

91.2

0.93

0.6

85.4

29.4

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

44.9

-0.4

3.6

74.21

37.7

Associated Gene:

Gene:

SKAP1

Ensembl Gene ID:

ENSAPLG00000007983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008287

4928465 - 5045546

117082