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Intron Name: Anas_platyrhynchos_platyrhynchos_28_504442_505221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

504442 - 505221

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

CCTCTTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

CCTCTTTCTACA

Flanking Amino Acid:

KKFNKSEKYISENILVLDIF

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.3

36.6

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

84.8

0.78

0.7

79.2

26.4

Minor 5ss

34.7

-1.7

3.4

49.7

41.3

Minor BPS

44.5

-0.4

1.8

51.81

40.2

Associated Gene:

Gene:

ASIC2

Ensembl Gene ID:

ENSAPLG00000009431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033879

401014 - 510023

109010

ENSAPLT00000009829

401168 - 510023

108856