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Intron Name: Anas_platyrhynchos_platyrhynchos_28_541043_543415_R

Intron Information:

Intron Rank:

136165

Intron Class:

major

Intron Phase:

Intron Coordinates:

541043 - 543415

Intron Length:

2373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCATCTCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TTCTCCCCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

71.6

0.49

0.9

65.8

34.7

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

49.8

0.07

2.1

77.09

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038164

540641 - 559602

18962

ENSAPLT00000035778

540641 - 543970

3330

ENSAPLT00000031262

540641 - 547381

6741