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Intron Name: Anas_platyrhynchos_platyrhynchos_28_591659_593185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

591659 - 593185

Intron Length:

1527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

ATGCGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTATTT

Flanking Amino Acid:

SQPPMASQRRGVKRRKMADK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

73.4

0.53

40.2

Minor 5ss

31.7

-2.1

3.4

39.1

46.1

Minor BPS

59.9

0.39

1.7

79.07

37.4

Associated Gene:

Gene:

SMARCD2

Ensembl Gene ID:

ENSAPLG00000009500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009940

591483 - 598411

6929