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Intron Name: Anas_platyrhynchos_platyrhynchos_28_593229_593767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

593229 - 593767

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCACTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TTCCACTTGACA

Flanking Amino Acid:

KMADKVLPQRIRELVPESQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

72.5

0.51

68.1

37.2

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

64.3

0.44

1.5

73.28

38.1

Associated Gene:

Gene:

SMARCD2

Ensembl Gene ID:

ENSAPLG00000009500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009940

591483 - 598411

6929