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Intron Name: Anas_platyrhynchos_platyrhynchos_28_593891_594013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

593891 - 594013

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGCGTGAT

5'SS Class:

major

3'SS Sequence:

TCCTATTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

GTTTTCCTATTC

Flanking Amino Acid:

IQEAIKKPLTQKRKLRIYIS

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

68.9

37.7

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

77.3

0.62

0.8

71.7

32.5

Minor 5ss

28.3

-2.5

3.4

Minor BPS

51.1

0.01

1.9

67.35

38.4

Associated Gene:

Gene:

SMARCD2

Ensembl Gene ID:

ENSAPLG00000009500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009940

591483 - 598411

6929