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Intron Name: Anas_platyrhynchos_platyrhynchos_28_594134_594312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

594134 - 594312

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGGATA

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

CAAGCCTCATGC

Flanking Amino Acid:

LRVEGKLLEDPSKQKRKFSS

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.3

78.7

37.2

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

37.2

-1.4

3.3

47.8

41.5

Minor BPS

40.6

-0.7

44.3

43.5

Associated Gene:

Gene:

SMARCD2

Ensembl Gene ID:

ENSAPLG00000009500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009940

591483 - 598411

6929