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Intron Name: Anas_platyrhynchos_platyrhynchos_28_595943_596201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

595943 - 596201

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCCG

5'SS Class:

major

3'SS Sequence:

TCTGCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

GGGAGCTAAACA

Flanking Amino Acid:

YINCNRYFRQIFNCVRMRFS

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.3

66.3

45.2

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

76.2

0.59

0.8

66.3

35.8

Minor 5ss

-2.3

2.6

41.3

Minor BPS

45.4

-0.3

2.1

53.51

44.5

Associated Gene:

Gene:

SMARCD2

Ensembl Gene ID:

ENSAPLG00000009500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009940

591483 - 598411

6929