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Intron Name: Anas_platyrhynchos_platyrhynchos_28_596711_596873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

596711 - 596873

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGAT

5'SS Class:

major

3'SS Sequence:

CTGCCCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TGTCTCTCATCT

Flanking Amino Acid:

QQEIASLDAKIHETIESINQ

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.3

37.1

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

73.8

0.54

0.8

65.5

36.1

Minor 5ss

24.4

-2.9

3.6

36.9

47.7

Minor BPS

52.9

0.17

1.8

74.46

41.9

Associated Gene:

Gene:

SMARCD2

Ensembl Gene ID:

ENSAPLG00000009500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009940

591483 - 598411

6929