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Intron Name: Anas_platyrhynchos_platyrhynchos_28_597188_597300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

597188 - 597300

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCTCT

5'SS Class:

major

3'SS Sequence:

TCGCCTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CTTTCCCTAACT

Flanking Amino Acid:

EAVGRHIFAKVQQRRQELEQ

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

68.4

39.3

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

70.8

0.47

0.8

62.3

34.7

Minor 5ss

39.6

-1.2

3.3

56.2

48.2

Minor BPS

77.4

0.94

1.7

92.91

35.6

Associated Gene:

Gene:

SMARCD2

Ensembl Gene ID:

ENSAPLG00000009500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009940

591483 - 598411

6929