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Intron Name: Anas_platyrhynchos_platyrhynchos_28_597797_598789_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

597797 - 598789

Intron Length:

993

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCACAGACC

5'SS Class:

major

3'SS Sequence:

CGTCGGGCACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TGTTCACAAAAA

Flanking Amino Acid:

EMAVAKVGGAAGLAFGMTNF

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

72.6

34.8

Major BPS

65.3

0.38

71.6

30.1

Major PPT

53.6

0.08

1.1

43.3

42.2

Minor 5ss

21.5

-3.3

34.7

41.4

Minor BPS

-0.3

2.2

63.84

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017758

597762 - 599631

1870