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Intron Name: Anas_platyrhynchos_platyrhynchos_28_598993_599061_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

598993 - 599061

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAC|GCGGGGCAT

5'SS Class:

weak_major

3'SS Sequence:

AAGTGAAGGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GGGCGCAGAAGT

Flanking Amino Acid:

LKIHSRKMNLTPGVCTEAGM

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.9

55.4

42.2

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

39.4

-0.6

1.7

33.5

44.5

Minor 5ss

16.6

-3.9

3.9

27.4

37.3

Minor BPS

36.8

-0.9

2.1

49.1

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025406

598734 - 600570

1837