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Intron Name: Anas_platyrhynchos_platyrhynchos_28_599640_599801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

599640 - 599801

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGG

5'SS Class:

major

3'SS Sequence:

GGTCCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATGAT

U12 Branch Point Sequence:

CAGGGCTCAGCT

Flanking Amino Acid:

SELVQKFIGEGARMVRELFV

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

65.8

40.9

Major BPS

54.3

0.11

1.4

47.7

45.7

Major PPT

70.8

0.47

0.9

62.5

34.6

Minor 5ss

36.7

-1.5

3.1

47.6

47.9

Minor BPS

40.6

-0.6

2.1

52.89

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025406

598734 - 600570

1837

ENSAPLT00000020626

598734 - 600567

1834

ENSAPLT00000010560

598519 - 600728

2210

ENSAPLT00000028697

598734 - 600245

1512