Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_599929_600140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

599929 - 600140

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTGGCACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

TGTCGCTGAGGT

Flanking Amino Acid:

FEALGIAQPKGVLLYGPPGT

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

68.5

0.42

62.9

43.2

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

42.4

-0.5

2.2

63.32

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025406

598734 - 600570

1837

ENSAPLT00000020626

598734 - 600567

1834

ENSAPLT00000010560

598519 - 600728

2210