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Intron Name: Anas_platyrhynchos_platyrhynchos_28_605810_605889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

605810 - 605889

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

CTGTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

AGCCCCTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.3

39.8

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

0.43

0.9

62.1

34.8

Minor 5ss

23.7

-3

3.3

23.4

37.6

Minor BPS

48.4

-0.1

1.7

56.52

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010830

605784 - 612334

6551

Gene:

Ensembl Gene ID:

ENSAPLG00000025296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026556

605743 - 607787

2045