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Intron Name: Anas_platyrhynchos_platyrhynchos_28_605989_607764_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

605989 - 607764

Intron Length:

1776

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCGGGTGGT

5'SS Class:

major

3'SS Sequence:

CTGCGGTAGTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TTCAGTACAACT

Flanking Amino Acid:

RALLDLCAAPGTGCVCL*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.46

1.3

68.9

39.1

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

51.8

0.04

1.1

50.5

43.1

Minor 5ss

17.7

-3.7

3.9

30.8

43.2

Minor BPS

43.8

-0.3

2.1

65.64

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026556

605743 - 607787

2045