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Intron Name: Anas_platyrhynchos_platyrhynchos_28_605996_606186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

605996 - 606186

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGCAT

U12 Branch Point Sequence:

CGTGCCGTAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

59.9

0.25

1.5

71.4

45.1

Major PPT

81.5

0.71

0.8

76.5

32.1

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

-0.1

2.3

68.24

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010830

605784 - 612334

6551