Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_610026_610272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

610026 - 610272

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

CTCTCGCCCACT

Flanking Amino Acid:

LAERQRKSQTDKAKRKGQKK

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

68.2

42.9

Major BPS

55.4

0.13

1.2

59.5

Major PPT

76.5

0.6

0.7

68.6

31.8

Minor 5ss

28.4

-2.5

2.9

32.7

Minor BPS

38.4

-0.8

2.6

60.29

48.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010830

605784 - 612334

6551