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Intron Name: Anas_platyrhynchos_platyrhynchos_28_613734_613832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

613734 - 613832

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACAGAG

U12 Branch Point Sequence:

GGGACAGCGACA

Flanking Amino Acid:

YIPDKGSVAELKRQKLVKKV

Intron Amino Acid Position:

1302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

Major BPS

-0.6

1.4

32.4

34.9

Major PPT

73.3

0.52

0.8

64.5

36.5

Minor 5ss

32.6

-2

3.2

41.8

45.1

Minor BPS

36.2

-1.1

2.2

42.33

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007474

613056 - 634447

21392

ENSAPLT00000011197

613056 - 624191

11136