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Intron Name: Anas_platyrhynchos_platyrhynchos_28_615238_615339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

615238 - 615339

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACG

5'SS Class:

major

3'SS Sequence:

GCCCCTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGCCAC

U12 Branch Point Sequence:

GCAAAGCCACCT

Flanking Amino Acid:

VGKLFNNALQGGVSDELSLS

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.3

43.9

Major BPS

44.3

-0.3

1.2

47.9

36.7

Major PPT

77.9

0.63

0.8

71.7

32.7

Minor 5ss

32.9

-2

3.1

39.9

45.9

Minor BPS

28.6

-1.5

2.2

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007474

613056 - 634447

21392

ENSAPLT00000011197

613056 - 624191

11136