Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_615713_615899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

615713 - 615899

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTCAGCGTC

5'SS Class:

major

3'SS Sequence:

CATCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGAAT

U12 Branch Point Sequence:

CTGTCCCCATCT

Flanking Amino Acid:

RAKAQSFLQSGYQRELLYKH

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.4

62.5

43.7

Major BPS

59.4

0.24

1.5

69.7

44.2

Major PPT

76.9

0.61

0.8

30.4

Minor 5ss

36.8

-1.5

3.4

51.6

45.1

Minor BPS

-0.1

2.1

68.87

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011197

613056 - 624191

11136

ENSAPLT00000007474

613056 - 634447

21392