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Intron Name: Anas_platyrhynchos_platyrhynchos_28_631502_631898_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

631502 - 631898

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATGTGGGCAACT

Flanking Amino Acid:

PGKCATFEAETGRNGCFSTQ

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

83.3

0.75

0.7

80.8

24.4

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

37.8

-0.8

2.8

62.03

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007474

613056 - 634447

21392