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Intron Name: Anas_platyrhynchos_platyrhynchos_28_636241_636426_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

636241 - 636426

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAG

U12 Branch Point Sequence:

TTGTCCAGCAGC

Flanking Amino Acid:

FSSKDKKFTSGTCTIQVLPK

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

45.3

-0.2

1.7

58.2

48.3

Major PPT

81.3

0.7

72.7

32.1

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

-0.5

2.3

59.99

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025362

635005 - 645952

10948

ENSAPLT00000039409

635005 - 645687

10683