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Intron Name: Anas_platyrhynchos_platyrhynchos_28_636500_636690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

636500 - 636690

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

CTATCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

ACACCCCTGACC

Flanking Amino Acid:

GAFHLAVQAQVPIFPIVISP

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

79.6

0.67

0.8

73.7

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

50.8

0.01

1.7

59.48

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025362

635005 - 645952

10948

ENSAPLT00000039409

635005 - 645687

10683