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Intron Name: Anas_platyrhynchos_platyrhynchos_28_642274_642431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

642274 - 642431

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

ATGCCCTCCAGG

Flanking Amino Acid:

TVGANVPPSSEYYDMLEQRQ

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

92.7

0.96

0.6

88.4

21.2

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

-0.7

2.2

47.36

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018076

642154 - 645952

3799