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Intron Name: Anas_platyrhynchos_platyrhynchos_28_642793_644070_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

642793 - 644070

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGGC

5'SS Class:

major

3'SS Sequence:

TTCCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATCAG

U12 Branch Point Sequence:

TTCCTCCCCACA

Flanking Amino Acid:

GFGPSPAAAQPLMVPLQTGE

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

64.8

41.3

Major BPS

46.2

-0.2

1.6

51.5

43.9

Major PPT

78.3

0.64

0.7

72.6

25.8

Minor 5ss

35.7

-1.6

3.5

49.7

46.9

Minor BPS

42.3

-0.6

2.1

57.29

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039409

635005 - 645687

10683

ENSAPLT00000025362

635005 - 645952

10948

ENSAPLT00000018076

642154 - 645952

3799