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Intron Name: Anas_platyrhynchos_platyrhynchos_28_653220_656060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

653220 - 656060

Intron Length:

2841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

ATCCGCTGATCA

Flanking Amino Acid:

PAPPTAHGQQGCQTAWDGVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

0.57

1.2

41.2

Major PPT

73.9

0.54

0.8

64.8

36.3

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

44.4

-0.4

2.1

56.11

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006616

651497 - 660423

8927