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Intron Name: Anas_platyrhynchos_platyrhynchos_28_659000_659234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

659000 - 659234

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAA

U12 Branch Point Sequence:

TCCTCTCCCACA

Flanking Amino Acid:

VATRLQYDNHGCWDDYTSRF

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

52.4

0.06

1.3

55.6

40.2

Major PPT

77.6

0.62

0.7

26.3

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

43.1

-0.5

2.2

55.53

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006616

651497 - 660423

8927