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Intron Name: Anas_platyrhynchos_platyrhynchos_28_685451_690035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

685451 - 690035

Intron Length:

4585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGACTT

5'SS Class:

major

3'SS Sequence:

GCCTCCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATTAG

U12 Branch Point Sequence:

AAACCAGCAATT

Flanking Amino Acid:

RALKTITVIPGLKTIVGALI

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

71.5

40.2

Major BPS

46.3

-0.2

1.5

41.4

39.4

Major PPT

66.6

0.37

0.8

57.7

33.2

Minor 5ss

31.1

-2.2

3.5

46.9

48.4

Minor BPS

40.2

-0.6

2.2

56.02

39.6

Associated Gene:

Gene:

SCN4A

Ensembl Gene ID:

ENSAPLG00000004906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005205

683340 - 716182

32843