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Intron Name: Anas_platyrhynchos_platyrhynchos_28_690333_692471_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

690333 - 692471

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTATCTGCGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCTAT

U12 Branch Point Sequence:

CTTTCCCTATCT

Flanking Amino Acid:

FDFEAYINDEANFYFLEGAL

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

56.2

0.15

1.3

54.7

42.5

Major PPT

58.1

0.18

1.1

59.1

35.9

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

0.49

84.68

41.9

Associated Gene:

Gene:

SCN4A

Ensembl Gene ID:

ENSAPLG00000004906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005205

683340 - 716182

32843