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Intron Name: Anas_platyrhynchos_platyrhynchos_28_697489_699115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

697489 - 699115

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

ATGTTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTGAGCAAACT

Flanking Amino Acid:

FENVLTVGNLVFTGIFTAEM

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

59.8

45.2

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

72.9

0.52

0.9

66.1

35.3

Minor 5ss

38.5

-1.3

3.2

48.4

42.9

Minor BPS

40.6

-0.6

2.6

69.28

47.2

Associated Gene:

Gene:

SCN4A

Ensembl Gene ID:

ENSAPLG00000004906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005205

683340 - 716182

32843